Conda & Mamba Explained: Full Setup (Windows, Ubuntu, Fedora) (Pre3b)
In this video, we walk through the complete installation and configuration of Conda and Mamba on Windows, Ubuntu, and Fedora — and go beyond by setting up environments, installing packages, and making the system ready for serious bioinformatics or Python-based work.
Topics covered:
What is Conda? How to set it up in scientific workflows
Installing Anaconda, Miniconda, and Miniforge
Using Conda and Mamba on Linux & Windows
Understanding the difference between channels: defaults, conda-forge, and bioconda
Creating, activating, and managing Conda environments
Installing multiple tools with a single command.
Installing packages from specific channels and specific versions (e.g., Python 2.7)
Updating, removing packages and environments
Exporting environments for reproducibility and sharing
Plus...
How to disable auto-activation of base
If you're planning to set up a robust and clean development or bioinformatics environment, this video will walk you through every step — visually and practically.
References:
https://www.anaconda.com/
https://anaconda.org/
Miniforge - https://github.com/conda-forge/miniforge
Mamba - https://github.com/mamba-org/mamba
Conda docs - https://docs.conda.io/en/latest/
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00:00 - Introduction
02:50 - Anaconda
04:35 - Miniconda
05:50 - Miniforge
08:00 - Packages & Environments
15:10 - Uninstall
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